http://www.chemistrymag.org/cji/2003/05a080nc.htm

  Oct. 1, 2003  Vol.5 No.10 P.80 Copyright cij17logo.gif (917 bytes)


Study on the standard enthalpy of formation of 2-amino-pyrimidine derivative and their manganese complexes

Jiao Baojuan, Wei Qing, Chen Sanping, Zhang Sumin, Gao Shengli
(Shaanxi Key Laboratory of Physico-Inorganic Chemistry, Department of Chemistry, Northwest University, Xi'an Shaanxi 710069, China)

Received Jul. 6, 2003; Supported by the Education Committee of Shaanxi Province for financial support (No. HF01304)

Abstract The complexes of hydrous manganese chloride with 2-amino-4, 6-dimethyl-pyrimidine (ADMP) and 2-amino-4, 6-dimethoxygenpyrimidine (AMP) were prepared through reflux in alcohol. The compositions of the complexes Mn(ADMP)2Cl2 and Mn(AMP)2Cl2 were determined by chemical and elemental analyses. The complexes were characterized by IR, XPS, 1H NMR and TG-DTG techniques. The constant-volume combustion energies of ADMP, AMP, Mn(ADMP)2Cl2 and Mn(AMP)2Cl2,   were determined by a precise rotating bomb calorimeter at 298.15K. They were (3664.53 ㊣ 1.18) kJ · mol-1, (3340.01 ㊣ 1.54) kJ · mol-1, (7043.08 ㊣ 3.13) kJ · mol-1, and (6058.71 ㊣ 3.18) kJ · mol-1. Their standard enthalpies of combustion, , and standard enthalpies of formation, , were calculated. They were (3666.39 ㊣ 1.18) kJ · mol-1, (3339.39 ㊣ 1.54) kJ · mol-1, (7043.08 ㊣ 3.13) kJ · mol-1, (6053.75 ㊣3.18) kJ · mol-1 and (19.09 ㊣ 1.43) kJ · mol-1, (307.91 ㊣ 1.74) kJ · mol-1, (669.90 ㊣ 3.51) kJ · mol-1, (1659.23 ㊣ 3.56) kJ · mol-1.
Keywords manganese chloride, 2-amino-4, 6-dimethyl-pyrimidine, 2-amino-4, 6-dimethoxygen-pyrimidine, standard enthalpy of combustion, standard enthalpy of formation

The pyrimidines as a class are known to possess extraordinary biological properties that are generally distinguished qualitatively by their applications in pesticide, herbicide, bactericide, and medicine intermediates [1]. A survey of these applications and a number of the related variations that are recently developed, such as the extraordinary effective herbicide of sulfonyl sulfourea, reveals the broad biological importance just because of the wide occurrence of pyrimidine ring systems in these molecules [2]. It has been shown that the medicine intermediates in the complexes of metal ions and pyrimidines could prolong the pharmaceutical activity and effective life, and reduce the damage to mammal [1, 3 -8]. When the complexes of Pt or Pd with pyrimidine are employed as medicine additives, they are harmful to human body, especially to some organs such as kidneys, although they are identified as the most effective drugs used to treat cancer by now. If the roles of Pt and Pd in these complexes were taken by such microelements that are necessary for life as Cu, Zn or Co, et al, the toxicity and the side effect of these complexes would be decreased while the power and efficiency of the medicine are preserved.
   
In the present work, the solid complexes of the MnCl2 with 2-amino-4, 6-dimethyl-pyrimidine (ADMP) and 2-amino-4, 6-dimethoxygenpyrimidine (AMP) were prepared. The compositions of these complexes were determined by chemical and elemental analyses, and the complexes were characterized by IR, XPS, 1H NMR and TG-DTG techniques. The constant volume-combustion energies of ADMP (a), AMP (c), Mn(ADMP)2Cl2 (b) and Mn(AMP)2Cl2 (d) were determined by a precise rotating bomb, the standard combustion enthalpies and the standard formation enthalpies were calculated. Clearly the study of the complexes is of substantial practical, as well as theoretical significance.

1 EXPERIMENTAL
1.1 Reagents and experimental conditions

All chemicals and solvents were of anal. grade and used after further purification. Guanidine nitrate, diethyl malonate and acetylpropyl ketone were made in the Second Branch of The Head Reagent Factory of Shanghai; alcohol, MnCl2 · 4H2O, phosphorus oxychloride, triethylbenzylamine chloride, sodium methylate and K2CO3 were purchased from the Chemical Reagent Factory of Xi'an. ADMP and AMP were synthesized according to Ref. [7, 8]. The yield of white solid product (ADMP) is 99 %, with the melting point of 152-152.4ºC,better than 152.9-154.4 ºC in the literature [7].Referred to Ref. [9], the synthesis method of 2-amino-4, 6-dichloro-pyrimidine was ameliorated. The white crystal of AMP was prepared. The yield of AMP was beyond 80 %, and its melting point locates in the range of 97.0-97.5 ºC.
    Melting point of the compounds was measured with WRS-1A digital melting-point apparatus. Mn2+ content was complexometrically determined by EDTA, Cl- by the Fajans
' method and C, H, N contents were determined on a Perkin Elmer 2400 type elemental analyzer. The IR spectra (KBr pellets) were obtained on a Bruker EQ UINOX-550 spectrophotometer in the 400 4000 cm-1 region. XPS were taken on an ESCA PHI-5400 X-ray photoelectron spectrophotometer using Mgradiation X-ray source, the C1s electron in benzene was used as the internal standard, BE = 284.6 eV, and the accuracy of the measured BE value was + 0.1 eV. The NMR spectra of the compounds were measured with a Varian Unity INOVA-400 nuclear magnetic resonance spectrometer using TMS as the reference sample and C2D5OD as the solvent. TG and DTG data were determined by a Perkin Elmer thermogravimetric analyzer. All TG-DTG tests were performed under a dynamic atmosphere of dry nitrogen at a flow rate of 60 mL min-1, the heating rate was 10 deg min-1 and sample masses approximated to 1 mg.
    The constant-volume combustion energies of the compounds were determined by a precise rotating bomb calorimeter [10]. The main experimental procedures were described in Ref. [11]. The initial temperature was regulated to (25.0000 ㊣ 0.0005) ºC, and the initial oxygen pressure was 2.5 MPa. The correct value of the heat exchange was calculated according to the Linio
-Pyfengdelel-Wsawa formula [12]. The calorimeter was calibrated with benzoic acid of 99.999 % purity. It had an isothermal heat of combustion at 298.15 K of (-26434 ㊣ 3 ). The energy equivalent of calorimeter was determined to be (17936.01 ㊣ 9.08) kJ · K-1. The analytical methods for final products (gas, liquid, and solid) were the same as those in Ref. [10].
1.2 Preparation of the complexes        
For preparation of the complex b, 6.8577g (0.0557mol) of the ligand and 5.5099g (0.0278mol) of MnCl2 · 4H2O were weighed out, and separately dissolved in 50 mL and 25 mL of alcohol. When the solution of MnCl2 · 4H2O was warmed for a few minutes on a hot plate, the solution of the ligand was added dropwise into the solution of salt. Under the condition of reflux, the reaction proceeded further for 4 h. After evaporating a part of solvent, the precipitant appeared, and the reaction mixture was allowed to cool slowly to room temperature, followed by suction filtration. In order to remove the excessive ligand and salt from product, it was necessary for the reaction mixture to be rinsed thoroughly with hot alcohol and distilled water. An infrared heat lamp was employed to serve the drying of the product. Finally, the pale red product of the yield of 60 % was obtained. The complex d was prepared according to the procedures used for the complex b above, showing pale red color and the yield of 72 %. The purity of the complexes was greater than 99.9% checked by HPLC. The analytical results of the composition of these complexes are presented as follows. For b, wi (calc.): 14.76 % Mn, 19.09 % Cl, 38.60 % C, 4.81 % H, 22.58 % N; wi (found): 14.70 % Mn, 19.15 % Cl, 38.71 % C, 4.80 % H, 22.60 % N. For d, wi (calc.): 12.60 % Mn, 16.28 % Cl, 33.02 % C, 4.13 % H, 19.27 % N; wi (found): 12.55 % Mn, 16.33 % Cl, 33.05 % C, 4.18 % H, 19.37 % N. The compositions of the complexes b and d were identified as Mn(ADMP)2Cl2 and Mn(AMP)2Cl2.

(a)ADMP  (b) Mn(ADMP)2Cl2   (c) AMP (d) Mn(AMP)2Cl2
Fig.1 IR Spectra of the ligand and the complexes

2 RESULTS AND DISCUSSION
2.1 IR spectra of the complexes
               
IR spectra of the ligand and the complexes were shown in Fig.1. It is obvious from the infrared spectra of the compounds that there are differences between the main characteristic absorption peaks of the complexes and those of the ligand [13,14]. Compared with the characteristic absorption peaks of the ligand, the characteristic absorptions of CˊN and C-N in the ring of pyrimidine, as well as those of stretching vibration and bending vibration of N-H connected with the ring, have the shifts of 15 cm-1, 18 cm-1, 35 cm-1, and 40 cm-1 for the complex b and those of 20cm-1, 25 cm-1, 30 cm-1, and 40 cm-1 for the complex d. Based on the analyses above, it is shown that for the ligand the nitrogen atom of the amino group and one of the nitrogen atoms of the pyrimidine coordinate to Mn2+ in a bidentate fashion. The characteristic vibrations of Cl- in the complexes occur in the fingerprint region of 200 400 cm-1, which is difficult to show in the recorder.
2.2 XPS spectra of the complexes
Consulting Ref. [15], the binding energy data of the internal shell electron for the main atoms of the compounds obtained from XPS spectra of the complexes, are listed in Table 1.

Table 1 Binding Energy Data / eV

Compound

N1s(amino)

N1s(the ring of pyrimidine)

MnCl2·4H2O

199.4

642.2

a

399.8

398.5

b

399.2

399.9

198.2

642.6

c

400.1

398.2

        

d

399.1

399.3

198.0

643.1

    Four conclusions could be drawn from the analyses of the binding data. 1. Compared with the binding energy of N1s of the amino group and that of N1s of the pyrimidine ring, there are changes for those of the complexes, which shows that nitrogen atom of the amino group and one of the nitrogen atoms in the pyrimidine coordinate to Mn2+. The decrease of the binding energy could be interpreted that rather amount of feedback of d electrons existing in the coordination bond of NMn2+ leads to the increase of the electron cloud density of N1s. 2. The binding energies of Cl- have a distinctly changing, showing that Cl-coordinates to Mn2+. 3. For the complexes b and d, the binding energy of Mn2+ has changes of 0.4 eV and 0.9 eV and the ranges of the differences are not wide, which illustrates a certain degree of feedback bond existing in the coordination bond. 4. Combining the analyses of XPS spectra with the results of IR analyses, it indicates that AMP has stronger coordination to Mn2+ than ADMP, which is credited to the strong donor strength of CH3O-.
2. 3 1H NMR spectra of the compounds                 
The chemical shifts for the main group of 1H NMR spectra of the ligand and the complexes are listed in Table 2, showing that two ligands coordinate to Mn2+ for the complexes.

Table 2 Chemical Shifts of the Main Groups for the compounds

Compound

Chemical shift d

a

2.304 (s, 6H, -CH3)

6.401(s, 1H, =CH-)

4.969 (s, 2H, -NH2)

b

2.303 (s, 12H, -CH3)

6.399 (s, 2H, =CH-)

4.923 (s, 4H, -NH2)

c

3.757 (s, 6H, -OCH3)

5.347(s, 1H, =CH-)

6.563(s, 2H, -NH2)

d

3.760 (s, 12H, -OCH3)

4.871 (s, 2H, =CH-)

5.486 (s, 4H, -NH2)

2. 4 Thermostability of the complexes
Thermostability of the solid complexes was investigated by TG-DTG and the TG curves of the complexes are depicted in Fig 2. The curves of TG-DTG concerning the compounds reflect that the experimental results for the residual amount of loss of weight are in good agreement with the calculated results, and the intermediate and final products of the thermal decomposition of the complexes are identified by IR spectra as well. The thermal decomposition processes of the complexes are summarized in Table 3.

    Obviously, the complexes b and d were completely decomposed into manganese chloride after processing skeleton splitting of part of the ligand.


Fig. 2 TG-DTG curves of the complexes




Table 3 Thermoanalytical results of the complexes

Complex

Decomposition product

Decomposition temperature / ºC

Residual rate / %

b

Mn(ADMP)2Cl2·MnCl2
MnCl2

30-127-146*
146-204-320

66.42 (66.91)**
33.83 (33.82)

d

Mn(AMP)2Cl2·MnCl2
MnCl2

30-133-154
154-233-362

64.67(64.43)
29.02(28.85)

* The intermediate data were peak temperatures of DTG curves. ** The data in brackets were calculated values

Table 4 The Experimental Results for Combustion Energies for a, b,c and d.

Compound

No

Mass of sample m/g

Calibrated heat of combustion wire qc / J

Calibrated heat of acid containing nitrogen qn / J

Calibrated

DT/K

Combustion energy of sample

a

1

0.80525

12.60

70.91

1.3344

29725.72

2

0.69770

12.60

61.44

1.1567

29736.82

3

0.74586

12.60

65.68

1.2378

29768.32

4

0.78249

9.00

68.91

1.2986

29773.94

5

0.80021

12.60

70.47

1.3266

29738.03

6

0.79233

12.60

69.77

1.3155

29782.50

mean

29754.22㊣9.60

b

1

1.00310

12.60

183.80

1.0641

18899.56

2

1.01478

12.60

185.95

1.0793

18949.54

3

1.00635

12.60

184.40

1.0695

18934.52

4

1.06526

12.60

195.20

1.1310

18916.51

5

1.04723

11.70

191.90

1.1112

18905.86

6

1.06545

12.60

195.23

1.1328

18943.52

mean

    

18924.92㊣8.41

c

1

0.77961

12.60

67.17

0.9369

21530.39

2

1.03304

12.60

89.38

1.2400

21509.09

3

1.90079

12.60

78.28

1.0912

21560.98

4

1.00319

12.60

86.60

1.2038

21501.25

5

1.01272

12.60

87.42

1.2179

21509.37

6

1.00303

12.60

86.58

1.2040

21509.15

mean

         

21526.70㊣9.95

d

1

1.15142

12.60

187.67

0.9002

13899.23

2

1.04970

12.60

171.15

0.8201

13888.38

3

1.06786

12.60

174.12

0.8362

13920.81

4

1.10235

12.60

179.75

0.8601

13870.42

5

1.11249

12.60

181.40

0.8693

13891.38

6

1.11533

12.60

181.86

0.8706

13876.57

mean

       

13891.15㊣7.30

2. 5 Combustion Energy of the compounds                
Standard enthalpies of formation of ligand and complexes are studied. The determination method of constant volume combustion energy for the sample is the same as the calibration of the calorimeter with benzoic acid. The combustion energies of the samples are calculated by the formula
(1)
where (sample, s) denotes the constant volume combustion energy of the samples, W is the energy equivalent of the RBC-
III type calorimeter (in J · K-1), DT the correct value of the temperature rising, a the length of actual Ni -Cr wire consumed (in cm), G the combustion enthalpy of Ni -
Cr wire for ignition (0.9 J · cm-1), 5.983 the formation enthalpy and solution enthalpy of nitric acid corresponding to 1 cm3 of 0.1000 mol· cm-3 solution NaOH (in J · cm-3), b the volume in cm3 of consumed 0.1000 mol· dm-3 solution of NaOH and m the mass in g of the sample. The results of the calculations are given in Table 4.
2. 6 Standard Combustion Enthalpies of the Compounds
The standard combustion enthalpy of the compounds,, is referred to the combustion enthalpy change of the following ideal combustion reaction at 298.15 K and 101.325 kPa.
C6H9N3 (s) + O2 (g) = 6CO2 (g) +H2O (l) + N2 (g) (2)
C6H9N3O2 (s) + O2 (g) = 6CO2 (g) +H2O (l) + N2 (g) (3)

Mn(ADMP)2Cl2 (s) + 17 O2 (g) = MnO2 (s) + 12 CO2 (g) + 8 H2O (l) + 2 HCl (g) + 3 N2 (g) (4)

Mn(AMP)2Cl2 (s) + 15O2 (g) = MnO2 (s) + 12 CO2 (g) + 8 H2O (l) + 2 HCl (g) + 3 N2 (g) (5)

The standard combustion enthalpies of the samples are calculated by the following equations

(6)

(7)

where ng is the total amount of substance (in mole) of gases present as products or reactants, k = 8.314 J · mol-1 ·K-1, T = 298.15 K. The results of the calculations are given in Table 5.

Table 5 Combustion Energies, Standard Enthalpies of Combustion and Standard Enthalpies of Formation for a, b, c and d

Compound

/(kJ·mol-1)

/(kJ·mol-1)

/(kJ·mol-1)

a

3664.53㊣1.18

3666.39㊣1.18

-19.09㊣1.43

b

7043.08㊣3.13

7043.08㊣3.13

669.90㊣3.51

c

3340.01㊣1.54

3339.39㊣1.54

307.91㊣1.74

d

6058.71㊣3.18

6053.75㊣3.18

1659.23㊣3.56

2.7 Standard Enthalpies of Formation of the compounds
The standard enthalpies of formation of the samples, , are calculated by Hess's law according to the following thermochemical equations

(8)

(9)

(10)

(11)

where = 530.03 kJ · mol-1, = (393.510.13) kJ · mol-1,

= (285.83 0.042) kJ · mol-1, = (92.31 0.03) kJ · mol-1 [16].
    The detailed list of the results of the calculations is presented in Table 5.
    As described in Table 5, thermo stabilizations of the complexes decrease in the order Mn(AMP)2Cl2, Mn(ADMP)2Cl2, AMP
and ADMP, which is related to the structures of the substances.

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